STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ49302.1ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter. (285 aa)    
Predicted Functional Partners:
AFZ50161.1
ABC-type antimicrobial peptide transport system, permease component; PFAM: Predicted permease.
 
 0.988
AFZ51643.1
PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
0.865
pstB
Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
 
  
0.851
AFZ51049.1
ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region; ABC transporter.
 
     
0.816
AFZ51538.1
TIGRFAM: RND family efflux transporter, MFP subunit; ABC exporter membrane fusion protein, DevB family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.754
AFZ49933.1
TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.528
AFZ49716.1
TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.502
AFZ49702.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
    0.468
AFZ48954.1
PFAM: HlyD family secretion protein; TIGRFAM: ABC exporter membrane fusion protein, DevB family.
  
 
 0.459
AFZ48955.1
DevC protein; PFAM: Predicted permease; TIGRFAM: DevC protein.
   
 
 0.457
Your Current Organism:
Dactylococcopsis salina
NCBI taxonomy Id: 13035
Other names: D. salina PCC 8305, Dactylococcopsis salina PCC 8305, Dactylococcopsis sp. PCC 8305, Myxobactron salinum PCC 8305
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