STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ49792.1PFAM: Mechanosensitive ion channel. (279 aa)    
Predicted Functional Partners:
AFZ49793.1
Hypothetical protein.
     0.976
AFZ49791.1
Putative esterase of the alpha-beta hydrolase superfamily; PFAM: Patatin-like phospholipase.
       0.613
AFZ49790.1
PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.612
AFZ50570.1
PFAM: Mechanosensitive ion channel.
  
     0.610
AFZ50885.1
PFAM: Mechanosensitive ion channel.
  
     0.590
AFZ50761.1
PFAM: Mechanosensitive ion channel.
  
     0.588
AFZ50571.1
PFAM: Mechanosensitive ion channel.
  
     0.557
AFZ50883.1
PFAM: Mechanosensitive ion channel.
  
     0.537
AFZ50320.1
PFAM: Amino acid permease.
  
   
 0.494
AFZ50491.1
Hypothetical protein.
  
     0.446
Your Current Organism:
Dactylococcopsis salina
NCBI taxonomy Id: 13035
Other names: D. salina PCC 8305, Dactylococcopsis salina PCC 8305, Dactylococcopsis sp. PCC 8305, Myxobactron salinum PCC 8305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.