STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ49930.1Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain. (122 aa)    
Predicted Functional Partners:
AFZ50956.1
Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain.
  
     0.723
AFZ49846.1
Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain.
  
     0.714
AFZ51500.1
Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain.
  
     0.650
AFZ49931.1
NADH dehydrogenase, FAD-containing subunit; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
 
     0.635
AFZ49928.1
Hypothetical protein.
 
     0.567
AFZ51144.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.565
AFZ49929.1
Thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
     
 0.536
ybeY
Metalloprotein, YbeY/UPF0054 family; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
    
   0.529
AFZ49932.1
Putative transcriptional regulator; PFAM: Bacterial regulatory protein, arsR family.
  
    0.516
rpsQ
30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
   
   0.509
Your Current Organism:
Dactylococcopsis salina
NCBI taxonomy Id: 13035
Other names: D. salina PCC 8305, Dactylococcopsis salina PCC 8305, Dactylococcopsis sp. PCC 8305, Myxobactron salinum PCC 8305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.