STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EOC99560.1Hypothetical protein. (172 aa)    
Predicted Functional Partners:
EOC99558.1
YeeE/YedE-like protein.
     0.992
EOC99559.1
SirA-like protein; Belongs to the sulfur carrier protein TusA family.
 
  
 0.966
EOD00820.1
Hypothetical protein; Belongs to the sulfur carrier protein TusA family.
 
  
 0.847
EOD01220.1
Hypothetical protein.
 
  
 0.481
EOD01221.1
Hypothetical protein.
 
  
 0.470
EOC99556.1
Two-component sensor histidine kinase.
       0.453
EOC99557.1
Fructose response regulator of fruA and EII fructose/mannose.
       0.453
EOC99561.1
LysR family transcriptional regulator YeiE; Belongs to the LysR transcriptional regulatory family.
 
     0.423
Your Current Organism:
Caldisalinibacter kiritimatiensis
NCBI taxonomy Id: 1304284
Other names: C. kiritimatiensis, Caldisalinibacter kiritimatiensis Ben Hania et al. 2015, Clostridiaceae bacterium L21-TH-D2, DSM 26826, JCM 18664, strain L21-TH-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.