STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000526375_01256Unannotated protein. (510 aa)    
Predicted Functional Partners:
GCA_000526375_02259
Unannotated protein.
   
 0.968
GCA_000526375_01008
Unannotated protein.
    
 
 0.948
GCA_000526375_01339
Unannotated protein.
    
 0.911
GCA_000526375_01458
Unannotated protein.
   
  0.896
GCA_000526375_02759
Unannotated protein.
   
  0.896
GCA_000526375_00299
Unannotated protein.
     
 0.885
GCA_000526375_00300
Unannotated protein.
     
 0.885
GCA_000526375_01780
Unannotated protein.
   
 0.877
GCA_000526375_01749
Unannotated protein.
    
  0.870
GCA_000526375_02205
Unannotated protein.
    
  0.870
Your Current Organism:
Aminiphilus circumscriptus
NCBI taxonomy Id: 1304874
Other names: A. circumscriptus DSM 16581, Aminiphilus circumscriptus DSM 16581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.