STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620305_01636Unannotated protein. (674 aa)    
Predicted Functional Partners:
GCA_000620305_01633
Unannotated protein.
 
 0.999
GCA_000620305_01630
Unannotated protein.
 
 0.998
GCA_000620305_01648
Unannotated protein.
 
 0.991
GCA_000620305_01634
Unannotated protein.
 
    0.879
GCA_000620305_00612
Unannotated protein.
  
 
 0.869
GCA_000620305_03523
Unannotated protein.
  
 
 0.851
GCA_000620305_01635
Unannotated protein.
 
     0.734
GCA_000620305_01585
Unannotated protein.
  
  
 0.458
GCA_000620305_03649
Unannotated protein.
     
 0.429
GCA_000620305_03432
Unannotated protein.
     
 0.417
Your Current Organism:
Desulfitibacter alkalitolerans
NCBI taxonomy Id: 1304884
Other names: D. alkalitolerans DSM 16504, Desulfitibacter alkalitolerans DSM 16504
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.