STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421285_04684Unannotated protein. (275 aa)    
Predicted Functional Partners:
GCA_000421285_04569
Unannotated protein.
    
 0.803
GCA_000421285_04468
Unannotated protein.
  
     0.754
GCA_000421285_04685
Unannotated protein.
       0.718
GCA_000421285_01390
Unannotated protein.
  
     0.623
GCA_000421285_00232
Unannotated protein.
  
     0.615
GCA_000421285_03181
Unannotated protein.
    
 0.609
GCA_000421285_02664
Unannotated protein.
    
 0.587
GCA_000421285_04179
Unannotated protein.
  
     0.561
GCA_000421285_02722
Unannotated protein.
  
     0.543
GCA_000421285_04172
Unannotated protein.
  
     0.542
Your Current Organism:
Desulfotignum balticum
NCBI taxonomy Id: 1304886
Other names: D. balticum DSM 7044, Desulfotignum balticum DSM 7044
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.