STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF16514.1Hypothetical protein. (289 aa)    
Predicted Functional Partners:
SMF46969.1
PAS domain S-box-containing protein.
   
 0.767
SMF14744.1
Signal transduction histidine kinase.
   
 0.738
SMF60942.1
Chemotaxis protein CheY-P-specific phosphatase CheC.
  
 
   0.698
SMF20888.1
Signal transduction histidine kinase.
   
 0.679
SMF56655.1
Na+/proline symporter.
  
 0.658
SMF36717.1
Chorismate mutase.
     
 0.645
SMF28877.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.612
aroA
3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
    
 0.610
SMF08897.1
HD-GYP domain.
  
 
  0.603
SMF16537.1
Predicted lipase.
 
     0.595
Your Current Organism:
Alteromonadaceae bacterium Bs31
NCBI taxonomy Id: 1304903
Other names: A. bacterium Bs31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.