Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKJ63566.1 | AKJ63567.1 | L21SP4_00285 | L21SP4_00286 | Tfp pilus assembly protein FimT. | Hypothetical protein. | 0.773 |
| AKJ63566.1 | AKJ63568.1 | L21SP4_00285 | L21SP4_00287 | Tfp pilus assembly protein FimT. | Hypothetical protein; Prepilin-type N-terminal cleavage/methylation domain. | 0.681 |
| AKJ63566.1 | def | L21SP4_00285 | L21SP4_00284 | Tfp pilus assembly protein FimT. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.518 |
| AKJ63566.1 | phoP_1 | L21SP4_00285 | L21SP4_00288 | Tfp pilus assembly protein FimT. | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | 0.491 |
| AKJ63566.1 | phoR | L21SP4_00285 | L21SP4_00289 | Tfp pilus assembly protein FimT. | Alkaline phosphatase synthesis sensor protein PhoR. | 0.465 |
| AKJ63567.1 | AKJ63566.1 | L21SP4_00286 | L21SP4_00285 | Hypothetical protein. | Tfp pilus assembly protein FimT. | 0.773 |
| AKJ63567.1 | AKJ63568.1 | L21SP4_00286 | L21SP4_00287 | Hypothetical protein. | Hypothetical protein; Prepilin-type N-terminal cleavage/methylation domain. | 0.664 |
| AKJ63567.1 | def | L21SP4_00286 | L21SP4_00284 | Hypothetical protein. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.518 |
| AKJ63567.1 | phoP_1 | L21SP4_00286 | L21SP4_00288 | Hypothetical protein. | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | 0.491 |
| AKJ63567.1 | phoR | L21SP4_00286 | L21SP4_00289 | Hypothetical protein. | Alkaline phosphatase synthesis sensor protein PhoR. | 0.465 |
| AKJ63568.1 | AKJ63566.1 | L21SP4_00287 | L21SP4_00285 | Hypothetical protein; Prepilin-type N-terminal cleavage/methylation domain. | Tfp pilus assembly protein FimT. | 0.681 |
| AKJ63568.1 | AKJ63567.1 | L21SP4_00287 | L21SP4_00286 | Hypothetical protein; Prepilin-type N-terminal cleavage/methylation domain. | Hypothetical protein. | 0.664 |
| AKJ63568.1 | def | L21SP4_00287 | L21SP4_00284 | Hypothetical protein; Prepilin-type N-terminal cleavage/methylation domain. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.453 |
| AKJ63568.1 | phoP_1 | L21SP4_00287 | L21SP4_00288 | Hypothetical protein; Prepilin-type N-terminal cleavage/methylation domain. | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | 0.565 |
| AKJ63568.1 | phoR | L21SP4_00287 | L21SP4_00289 | Hypothetical protein; Prepilin-type N-terminal cleavage/methylation domain. | Alkaline phosphatase synthesis sensor protein PhoR. | 0.534 |
| def | AKJ63566.1 | L21SP4_00284 | L21SP4_00285 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Tfp pilus assembly protein FimT. | 0.518 |
| def | AKJ63567.1 | L21SP4_00284 | L21SP4_00286 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Hypothetical protein. | 0.518 |
| def | AKJ63568.1 | L21SP4_00284 | L21SP4_00287 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Hypothetical protein; Prepilin-type N-terminal cleavage/methylation domain. | 0.453 |
| phoP_1 | AKJ63566.1 | L21SP4_00288 | L21SP4_00285 | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | Tfp pilus assembly protein FimT. | 0.491 |
| phoP_1 | AKJ63567.1 | L21SP4_00288 | L21SP4_00286 | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | Hypothetical protein. | 0.491 |
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