STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT89743.1Manganese/iron transport system permease protein. (313 aa)    
Predicted Functional Partners:
SDT90310.1
Zinc transport system permease protein.
  
  
  0.999
SDT93081.1
Amino acid ABC transporter membrane protein, PAAT family.
   
 
 0.999
SDT89725.1
Zinc/manganese transport system substrate-binding protein.
 
 
 0.998
SDT89752.1
Manganese/iron transport system permease protein.
 
  
  0.998
SDT89732.1
Manganese/iron transport system ATP-binding protein.
 
 0.997
SDT89555.1
Manganese/iron transport system ATP-binding protein.
 
 0.987
SDT89545.1
Manganese/iron transport system permease protein.
 
  
 
0.984
SDT86081.1
ABC-type glutathione transport system ATPase component, contains duplicated ATPase domain.
    
  0.963
SDT86116.1
ABC-2 type transport system permease protein.
    
  0.954
SDU05478.1
ABC-2 type transport system permease protein.
    
  0.954
Your Current Organism:
Schaalia radingae
NCBI taxonomy Id: 131110
Other names: ATCC 51856, Actinomyces radingae, BCCM/LMG:15960, CCUG 32394, CCUG 34270, CDC coryneform group E, CIP 105358, DSM 9169, LMG 15960, LMG:15960, S. radingae, strain APL1
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