STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN00568.1Aminotransferase. (394 aa)    
Predicted Functional Partners:
dapD
Protein synonym:2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase.
  
 
 0.941
argD
Acetylornithine aminotransferase.
  
 
 0.912
BAN00569.1
Putative carbon-nitrogen hydrolase.
  
 0.871
gltB
Glutamate synthase large subunit; Protein synonym:glutamine 2-oxoglutarate aminotransferase large subunit.
  
  
 0.562
BAN00567.1
Hypothetical protein.
       0.535
pgl/pgi
6-phosphogluconolactonase/glucose-6-phosphate isomerase.
  
 
 0.462
dapF
Diaminopimelate epimerase.
  
 
 0.449
BAN03698.1
Putative citrate synthase.
  
 
 0.441
putA
Proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Bifunctional protein; protein synonym:bifunctional protein PutA.
  
 
 0.438
BAN02637.1
Putative oxidoreductase.
   
    0.416
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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