Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BAN00623.1 | dut | YM304_03090 | YM304_38230 | Putative 5'-nucleotidase. | Deoxyuridine 5'-triphosphate nucleotidohydrolase; Protein synonym:dUTP pyrophosphatase. | 0.903 |
| BAN00623.1 | surE | YM304_03090 | YM304_12110 | Putative 5'-nucleotidase. | 5'-nucleotidase SurE. | 0.918 |
| BAN00623.1 | tdk | YM304_03090 | YM304_26870 | Putative 5'-nucleotidase. | Thymidine kinase. | 0.904 |
| BAN00623.1 | tmk | YM304_03090 | YM304_03470 | Putative 5'-nucleotidase. | Protein synonym:dTMP kinase. | 0.932 |
| BAN03641.1 | tmk | YM304_33270 | YM304_03470 | Phosphatase. | Protein synonym:dTMP kinase. | 0.887 |
| dut | BAN00623.1 | YM304_38230 | YM304_03090 | Deoxyuridine 5'-triphosphate nucleotidohydrolase; Protein synonym:dUTP pyrophosphatase. | Putative 5'-nucleotidase. | 0.903 |
| dut | ndk | YM304_38230 | YM304_18350 | Deoxyuridine 5'-triphosphate nucleotidohydrolase; Protein synonym:dUTP pyrophosphatase. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.943 |
| dut | nrdA | YM304_38230 | YM304_14180 | Deoxyuridine 5'-triphosphate nucleotidohydrolase; Protein synonym:dUTP pyrophosphatase. | Ribonucleoside-diphosphate reductase large subunit. | 0.816 |
| dut | surE | YM304_38230 | YM304_12110 | Deoxyuridine 5'-triphosphate nucleotidohydrolase; Protein synonym:dUTP pyrophosphatase. | 5'-nucleotidase SurE. | 0.906 |
| dut | tdk | YM304_38230 | YM304_26870 | Deoxyuridine 5'-triphosphate nucleotidohydrolase; Protein synonym:dUTP pyrophosphatase. | Thymidine kinase. | 0.964 |
| dut | tmk | YM304_38230 | YM304_03470 | Deoxyuridine 5'-triphosphate nucleotidohydrolase; Protein synonym:dUTP pyrophosphatase. | Protein synonym:dTMP kinase. | 0.942 |
| holB | recR | YM304_03460 | YM304_37150 | Putative DNA polymerase III delta' subunit. | Recombination protein RecR. | 0.626 |
| holB | tmk | YM304_03460 | YM304_03470 | Putative DNA polymerase III delta' subunit. | Protein synonym:dTMP kinase. | 0.887 |
| ndk | dut | YM304_18350 | YM304_38230 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Deoxyuridine 5'-triphosphate nucleotidohydrolase; Protein synonym:dUTP pyrophosphatase. | 0.943 |
| ndk | nrdA | YM304_18350 | YM304_14180 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Ribonucleoside-diphosphate reductase large subunit. | 0.918 |
| ndk | nrdB | YM304_18350 | YM304_14190 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Ribonucleoside-diphosphate reductase small subunit. | 0.916 |
| ndk | tmk | YM304_18350 | YM304_03470 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Protein synonym:dTMP kinase. | 0.924 |
| nrdA | dut | YM304_14180 | YM304_38230 | Ribonucleoside-diphosphate reductase large subunit. | Deoxyuridine 5'-triphosphate nucleotidohydrolase; Protein synonym:dUTP pyrophosphatase. | 0.816 |
| nrdA | ndk | YM304_14180 | YM304_18350 | Ribonucleoside-diphosphate reductase large subunit. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.918 |
| nrdA | nrdB | YM304_14180 | YM304_14190 | Ribonucleoside-diphosphate reductase large subunit. | Ribonucleoside-diphosphate reductase small subunit. | 0.999 |
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