STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN01133.1Peptidase S01 family protein. (378 aa)    
Predicted Functional Partners:
arc
Proteasome-associated ATPase.
   
 0.927
katE
Catalase.
  
 0.708
BAN01917.1
Putative two-component histidine kinase.
  
  
 0.675
BAN03090.1
Hypothetical protein.
   
 0.668
glpK
Glycerol kinase.
   
 0.648
glpK-2
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
   
 0.648
glpK-3
Glycerol kinase.
   
 0.648
prcA
20S proteasome alpha-type subunit.
    
 0.610
prcB
20S proteasome beta-type subunit.
    
 0.610
alaS
alanyl-tRNA synthetase; Protein synonym:alanine--tRNA ligase.
  
 
 0.594
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.