STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ilvEBranched-chain-amino-acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (305 aa)    
Predicted Functional Partners:
leuA-2
Putative 2-isopropylmalate synthase; Protein synonym:alpha-isopropylmalate synthase.
 
 0.996
ilvD
Dihydroxy-acid dehydratase.
  
 0.992
leuA
Protein synonym:alpha-isopropylmalate synthase.
 
 0.981
BAN04213.1
Putative oxidoreductase.
  
 0.966
bkdA2
Branched-chain alpha-keto acid dehydrogenase E1 beta subunit.
  
 0.929
BAN01536.1
Cys/Met metabolism PLP-dependent enzyme.
  
 0.926
metB
Cystathionine gamma-synthase.
  
 0.926
panB
Protein synonym:ketopantoate hydroxymethyltransferase.
    
 0.924
BAN03673.1
Putative L-threo-3-hydroxyaspartate dehydratase; Protein synonym:threo-3-hydroxyaspartate ammonia-lyase.
  
 
 0.920
ilvA
Protein synonym:threonine deaminase.
  
 
 0.920
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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