STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN01766.1Putative polysaccharide biosynthesis protein. (502 aa)    
Predicted Functional Partners:
BAN01743.1
Putative undecaprenyl-phosphate glycosylphosphotransferase.
 
  
 0.906
BAN01767.1
Putative protein-tyrosine kinase.
 
  
 0.838
rmlB
dTDP-glucose 4,6-dehydratase.
  
  
 0.813
rmlC
Protein synonym:dTDP-4-dehydro-6-deoxy-D-glucose 3,5-epimerase.
  
  
 0.813
rmlA
Glucose-1-phosphate thymidylyltransferase; Protein synonym:dTDP-glucose synthase.
  
  
 0.803
ugd
UDP-glucose 6-dehydrogenase.
  
  
 0.766
ugd-2
UDP-glucose 6-dehydrogenase.
  
  
 0.766
BAN01765.1
Hypothetical protein.
  
  
 0.741
BAN01764.1
Glycosyltransferase.
 
  
 0.733
BAN02523.1
Putative polysaccharide biosynthesis protein.
 
  
 0.691
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.