STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
manAProtein synonym:phosphomannose isomerase. (321 aa)    
Predicted Functional Partners:
pgl/pgi
6-phosphogluconolactonase/glucose-6-phosphate isomerase.
 
 
 0.973
manB
Phosphomannomutase; Protein synonym:mannose phosphomutase.
  
 
 0.951
pgm
Phosphoglucomutase; Protein synonym:glucose phosphomutase.
  
 
 0.932
pfkB
6-phosphofructokinase PfkB.
    
 0.922
glmS
Putative glucosamine-6-phosphate synthase; Protein synonym:glutamine--fructose-6-phosphate aminotransferase.
  
 
 0.920
BAN02237.1
6-phosphofructokinase.
    
 0.919
BAN00616.1
Fructokinase.
    
 0.911
glpX
Fructose 1,6-bisphosphatase class II.
     
 0.904
tpiA
Triose-phosphate isomerase.
  
 
 0.480
BAN02911.1
Putative ATP-dependent RNA helicase.
  
     0.480
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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