STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN03829.1Hypothetical protein. (603 aa)    
Predicted Functional Partners:
BAN03828.1
Hypothetical protein.
 
    
0.617
BAN03830.1
Hypothetical protein.
       0.531
BAN01590.1
Hypothetical protein.
  
     0.504
BAN00350.1
Peptidase S08 family protein.
 
 
 0.426
rsrA
Anti-sigma factor.
  
   
 0.424
BAN00812.1
Hypothetical protein.
  
 
   0.408
BAN03831.1
Putative oxidoreductase.
       0.407
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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