STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN03991.1Hypothetical protein. (278 aa)    
Predicted Functional Partners:
BAN03990.1
Putative phosphoribosylaminoimidazole carboxylase.
  
 0.994
BAN03989.1
Hypothetical protein.
  
 0.988
BAN02538.1
Hypothetical protein.
 
  
 0.765
mnmA
tRNA-specific 2-thiouridylase MnmA.
    
 0.676
BAN03992.1
2'-5' RNA ligase family protein.
  
    0.636
nth
Putative endonuclease III; Protein synonym:DNA-(apurinic or apyrimidinic site) lyase.
 
    0.612
BAN03026.1
Putative aldo-keto reductase.
 
    0.591
BAN03083.1
Nucleoside-triphosphatase; Protein synonym:nucleoside triphosphate phosphohydrolase.
 
      0.549
xseB
Protein synonym:exonuclease VII small subunit.
   
    0.420
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.