STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN04342.1Hypothetical protein. (217 aa)    
Predicted Functional Partners:
BAN04343.1
Putative RNA polymerase ECF subfamily sigma factor.
 
     0.827
BAN02468.1
Hypothetical protein.
  
     0.735
BAN00869.1
Hypothetical protein.
  
     0.729
BAN02469.1
Hypothetical protein.
  
     0.680
BAN00868.1
Hypothetical protein.
  
     0.679
BAN00682.1
Hypothetical protein.
  
     0.670
BAN01489.1
Putative thiamine ABC transporter permease protein.
  
  
 0.590
BAN01832.1
Putative iron(III) ABC transporter permease protein.
  
  
 0.590
BAN03824.1
Hypothetical protein.
  
     0.491
BAN04344.1
Hypothetical protein.
       0.487
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.