STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000426825_02221Unannotated protein. (129 aa)    
Predicted Functional Partners:
GCA_000426825_02103
Unannotated protein.
  
  
  0.705
GCA_000426825_02220
Unannotated protein.
 
    0.683
GCA_000426825_02472
Unannotated protein.
    
  0.665
GCA_000426825_02222
Unannotated protein.
  
    0.651
GCA_000426825_02223
Unannotated protein.
       0.588
GCA_000426825_02224
Unannotated protein.
       0.588
GCA_000426825_00475
Unannotated protein.
  
  
 0.470
GCA_000426825_02225
Unannotated protein.
       0.464
GCA_000426825_00687
Unannotated protein.
    
  0.441
GCA_000426825_02226
Unannotated protein.
       0.420
Your Current Organism:
Thermonema rossianum
NCBI taxonomy Id: 1313301
Other names: T. rossianum DSM 10300, Thermonema rossianum DSM 10300
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.