STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPAG6Sperm associated antigen 6. (508 aa)    
Predicted Functional Partners:
KPNB1
Karyopherin subunit beta 1.
   
 0.875
CSE1L
Chromosome segregation 1 like.
   
 0.848
NUP153
Nucleoporin 153.
    
 
 0.694
NCBP1
Nuclear cap binding protein subunit 1.
   
 
 0.689
SPEF2
Sperm flagellar 2.
   
 0.688
ENSMUNP00000001650
annotation not available
    
   0.661
EXOSC10
Exosome component 10.
    
   0.661
RANBP2
E3 SUMO-protein ligase RanBP2.
   
 
 0.660
NCOA5
Nuclear receptor coactivator 5.
   
 
 0.657
ALS2
Alsin Rho guanine nucleotide exchange factor ALS2.
   
 
 0.656
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.