STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RDH16Retinol dehydrogenase 16-like. (216 aa)    
Predicted Functional Partners:
RDH10
Retinol dehydrogenase 10.
  
  
 0.923
DHRS11
Dehydrogenase/reductase 11.
  
 
 0.837
LOC101879843
Retinol dehydrogenase 8.
  
 
0.818
ALDH1A3
Aldehyde dehydrogenase 1 family member A3.
   
 
 0.807
CYP26A1
Cytochrome P450 26A1.
   
 0.806
HSD17B7
Hydroxysteroid 17-beta dehydrogenase 7.
     
 0.800
DHRS3
Dehydrogenase/reductase 3.
     
 0.800
SOAT1
Sterol O-acyltransferase 1.
   
 
 0.794
LOC101875550
Retinol dehydrogenase 12.
   
 
 0.792
HSD17B2
Hydroxysteroid 17-beta dehydrogenase 2.
  
 
 
0.791
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.