STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101870865Mortality factor 4 like 1. (324 aa)    
Predicted Functional Partners:
PHF12
PHD finger protein 12.
    
 
 0.990
MEAF6
MYST/Esa1 associated factor 6.
   
 0.985
YEATS4
YEATS domain containing 4.
    
 0.985
TRRAP
Transformation/transcription domain associated protein.
   
 0.984
DMAP1
DNA methyltransferase 1 associated protein 1.
    
 0.984
MRGBP
MRG domain binding protein.
   
 0.981
ACTL6A
Actin like 6A.
   
 0.981
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.970
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 0.970
H2AZ1
Histone H2A.Z.
   
 0.967
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.