STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATG13Autophagy related 13. (479 aa)    
Predicted Functional Partners:
RB1CC1
RB1 inducible coiled-coil 1.
    
 0.997
ULK1
Unc-51 like autophagy activating kinase 1.
   
 0.997
ULK2
Unc-51 like autophagy activating kinase 2.
   
 0.993
ATG14
Autophagy related 14.
   
 0.949
LOC101880783
Beclin 1.
    
 0.948
C9orf72
C9orf72-SMCR8 complex subunit.
  
 
 0.948
RPTOR
Regulatory associated protein of MTOR complex 1.
    
 0.941
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.941
LOC101876080
Autophagy related 9A.
   
 0.937
ATG9B
Autophagy related 9B.
   
 0.930
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.