A0A197JKG9 protein (Mortierella elongata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A197JKG9

HCP-like protein. (558 aa)

Predicted Functional Partners:

A0A197K1C8

0.758

A0A197JTG1

0.576

A0A197JG70

0.516

A0A197JQT8

0.516

A0A197JTI6

0.516

A0A197JXI1

0.516

A0A197KIR6

0.516

A0A197JH99

0.512

A0A197K977

0.512

A0A197KCC7

0.512

Your Current Organism:

Mortierella elongata

NCBI taxonomy Id: 1314771
Other names: M. elongata AG-77, Mortierella elongata AG-77

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A197JG70	A0A197JH99	Uncharacterized protein.	Uncharacterized protein.	0.794
A0A197JG70	A0A197JKG9	Uncharacterized protein.	HCP-like protein.	0.516
A0A197JG70	A0A197JTG1	Uncharacterized protein.	RING-type domain-containing protein.	0.768
A0A197JG70	A0A197JTI6	Uncharacterized protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.892
A0A197JG70	A0A197K1C8	Uncharacterized protein.	PRKCSH domain-containing protein.	0.952
A0A197JG70	A0A197K977	Uncharacterized protein.	Uncharacterized protein.	0.794
A0A197JG70	A0A197KCC7	Uncharacterized protein.	Uncharacterized protein.	0.900
A0A197JH99	A0A197JG70	Uncharacterized protein.	Uncharacterized protein.	0.794
A0A197JH99	A0A197JKG9	Uncharacterized protein.	HCP-like protein.	0.512
A0A197JH99	A0A197JQT8	Uncharacterized protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.794
A0A197JH99	A0A197JTG1	Uncharacterized protein.	RING-type domain-containing protein.	0.505
A0A197JH99	A0A197JTI6	Uncharacterized protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.794
A0A197JH99	A0A197JXI1	Uncharacterized protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.794
A0A197JH99	A0A197K1C8	Uncharacterized protein.	PRKCSH domain-containing protein.	0.941
A0A197JH99	A0A197KIR6	Uncharacterized protein.	Uncharacterized protein.	0.794
A0A197JKG9	A0A197JG70	HCP-like protein.	Uncharacterized protein.	0.516
A0A197JKG9	A0A197JH99	HCP-like protein.	Uncharacterized protein.	0.512
A0A197JKG9	A0A197JQT8	HCP-like protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.516
A0A197JKG9	A0A197JTG1	HCP-like protein.	RING-type domain-containing protein.	0.576
A0A197JKG9	A0A197JTI6	HCP-like protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.516