STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A166CYT1OTU-domain-containing protein. (337 aa)    
Predicted Functional Partners:
A0A166HX36
Valosin-containing protein; Belongs to the AAA ATPase family.
   
 0.989
A0A166FNJ7
UFD1-domain-containing protein.
   
 
 0.974
A0A166E6W8
PFU-domain-containing protein.
    
 
 0.972
A0A166J922
Polyubiquitin-tagged protein recognition complex, Npl4 component.
    
 
 0.970
A0A165YD83
SEP-domain-containing protein.
   
 
 0.968
A0A166CV77
U-box domain-containing protein.
    
 
 0.966
A0A166BIX3
AAA-domain-containing protein.
   
 0.952
A0A166CXI7
Ubiquitin-domain-containing protein.
   
 
 0.942
A0A166ID23
Uncharacterized protein.
   
 0.928
A0A166FDW3
Ubiquitin.
    
 
 0.877
Your Current Organism:
Sistotremastrum suecicum
NCBI taxonomy Id: 1314776
Other names: S. suecicum HHB10207 ss-3, Sistotremastrum suecicum HHB10207 ss-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.