A0A165DUE5 protein (Exidia glandulosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A165DUE5

Uncharacterized protein. (482 aa)

Predicted Functional Partners:

A0A165MF47

0.989

A0A166A4A2

0.989

A0A165PLL4

0.975

A0A165F317

0.970

A0A165H3P2

0.968

A0A165PN24

0.968

A0A165QNE0

0.965

A0A165CP39

0.964

A0A165GSA1

0.964

A0A165IAF7

0.964

Your Current Organism:

Exidia glandulosa

NCBI taxonomy Id: 1314781
Other names: E. glandulosa HHB12029, Exidia glandulosa HHB12029

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A165CP39	A0A165DUE5	Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.	Uncharacterized protein.	0.964
A0A165CP39	A0A165F317	Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.	Ribosomal protein L22e.	0.999
A0A165CP39	A0A165GSA1	Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.	Uncharacterized protein.	0.999
A0A165CP39	A0A165H3P2	Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.	60S ribosomal protein L21.	0.999
A0A165CP39	A0A165IAF7	Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.	Putative ribosomal protein S12, cytosolic; Belongs to the universal ribosomal protein uS19 family.	0.999
A0A165CP39	A0A165MF47	Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.	Uncharacterized protein.	0.992
A0A165CP39	A0A165PLL4	Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.	Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.	0.999
A0A165CP39	A0A165PN24	Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.999
A0A165CP39	A0A165QNE0	Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.	60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.	0.999
A0A165CP39	A0A166A4A2	Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.	mRNA export factor elf1.	0.992
A0A165DUE5	A0A165CP39	Uncharacterized protein.	Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.	0.964
A0A165DUE5	A0A165F317	Uncharacterized protein.	Ribosomal protein L22e.	0.970
A0A165DUE5	A0A165GSA1	Uncharacterized protein.	Uncharacterized protein.	0.964
A0A165DUE5	A0A165H3P2	Uncharacterized protein.	60S ribosomal protein L21.	0.968
A0A165DUE5	A0A165IAF7	Uncharacterized protein.	Putative ribosomal protein S12, cytosolic; Belongs to the universal ribosomal protein uS19 family.	0.964
A0A165DUE5	A0A165MF47	Uncharacterized protein.	Uncharacterized protein.	0.989
A0A165DUE5	A0A165PLL4	Uncharacterized protein.	Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.	0.975
A0A165DUE5	A0A165PN24	Uncharacterized protein.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.968
A0A165DUE5	A0A165QNE0	Uncharacterized protein.	60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.	0.965
A0A165DUE5	A0A166A4A2	Uncharacterized protein.	mRNA export factor elf1.	0.989