STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A165KLN4Transducin family protein/WD-40 repeat family protein. (534 aa)    
Predicted Functional Partners:
A0A165E604
Brix-domain-containing protein.
   
 
 0.972
A0A165FCL0
Eukaryotic rRNA processing.
   
 
 0.968
A0A165F311
RRM domain-containing protein.
   
 
 0.967
A0A165BLP0
Noc2-domain-containing protein.
   
 
 0.961
A0A165IZY0
Glutamate-rich WD repeat containing.
   
  
0.960
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.953
A0A165QVI1
WD-repeat-containing protein.
   
  
 0.950
A0A165NCW6
WD40 repeat-like protein.
   
  
 0.949
A0A165BXW5
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
   
  
 0.948
A0A165Q6F4
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.948
Your Current Organism:
Exidia glandulosa
NCBI taxonomy Id: 1314781
Other names: E. glandulosa HHB12029, Exidia glandulosa HHB12029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.