A0A165MI91 protein (Exidia glandulosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A165MI91

Chromate transporter. (499 aa)

Predicted Functional Partners:

A0A166N6P7

0.812

A0A165IDY9

0.780

A0A165IT69

0.780

A0A165Z9T2

0.678

A0A165R369

0.643

A0A165C176

0.636

A0A165JNV5

0.636

A0A165NEW3

0.635

A0A165QB39

0.635

A0A165M5D7

0.633

Your Current Organism:

Exidia glandulosa

NCBI taxonomy Id: 1314781
Other names: E. glandulosa HHB12029, Exidia glandulosa HHB12029

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A165C176	A0A165JNV5	Ribosomal protein S5 domain 2-like protein.	Uncharacterized protein.	0.999
A0A165C176	A0A165M5D7	Ribosomal protein S5 domain 2-like protein.	Uncharacterized protein.	0.999
A0A165C176	A0A165MI91	Ribosomal protein S5 domain 2-like protein.	Chromate transporter.	0.636
A0A165C176	A0A165NEW3	Ribosomal protein S5 domain 2-like protein.	Uncharacterized protein.	0.999
A0A165C176	A0A165QB39	Ribosomal protein S5 domain 2-like protein.	Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.	0.999
A0A165C176	A0A165R369	Ribosomal protein S5 domain 2-like protein.	Translational machinery component.	0.999
A0A165C176	A0A165Z9T2	Ribosomal protein S5 domain 2-like protein.	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	0.998
A0A165IDY9	A0A165IT69	Uncharacterized protein.	Molybdopterin binding oxidoreductase.	0.958
A0A165IDY9	A0A165MI91	Uncharacterized protein.	Chromate transporter.	0.780
A0A165IT69	A0A165IDY9	Molybdopterin binding oxidoreductase.	Uncharacterized protein.	0.958
A0A165IT69	A0A165MI91	Molybdopterin binding oxidoreductase.	Chromate transporter.	0.780
A0A165JNV5	A0A165C176	Uncharacterized protein.	Ribosomal protein S5 domain 2-like protein.	0.999
A0A165JNV5	A0A165M5D7	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A165JNV5	A0A165MI91	Uncharacterized protein.	Chromate transporter.	0.636
A0A165JNV5	A0A165NEW3	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A165JNV5	A0A165QB39	Uncharacterized protein.	Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.	0.999
A0A165JNV5	A0A165R369	Uncharacterized protein.	Translational machinery component.	0.999
A0A165JNV5	A0A165Z9T2	Uncharacterized protein.	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	0.998
A0A165M5D7	A0A165C176	Uncharacterized protein.	Ribosomal protein S5 domain 2-like protein.	0.999
A0A165M5D7	A0A165JNV5	Uncharacterized protein.	Uncharacterized protein.	0.999