STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A166N1R4Rab-GAP TBC domain-containing protein. (437 aa)    
Predicted Functional Partners:
A0A165B7T3
GTPase of the Ypt/Rab family.
    
 0.789
A0A165FI64
Ras-domain-containing protein.
    
 0.789
A0A165PR72
Uncharacterized protein.
    
 
 0.715
A0A165H2N1
Kinase-like protein.
    
  0.711
A0A165KAL2
DUF3543 domain-containing protein.
    
  0.711
A0A165IYM7
DUF974-domain-containing protein.
    
 
 0.638
A0A165CH34
Uncharacterized protein.
   
   0.626
A0A165PZI2
Sedlin.
    
 
 0.625
A0A165K044
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.
    
 
 0.608
A0A165JB35
TPR_REGION domain-containing protein.
    
 
 0.595
Your Current Organism:
Exidia glandulosa
NCBI taxonomy Id: 1314781
Other names: E. glandulosa HHB12029, Exidia glandulosa HHB12029
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