STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1YCC6WD40 repeat-like protein. (639 aa)    
Predicted Functional Partners:
A0A1Y1XZK0
Uncharacterized protein.
   
 
0.970
A0A1Y1ZB23
APG6-domain-containing protein.
    
 
 0.572
A0A1Y1XY04
Beach-domain-containing protein.
   
 
 0.571
A0A1Y1YNN6
Beach-domain-containing protein.
   
 
 0.571
A0A1Y1XMZ8
Sec63-domain-containing protein.
      
 0.485
A0A1Y1Y992
Pep3_Vps18 domain-containing protein.
      
 0.482
A0A1Y1Y6G1
Uncharacterized protein.
      
 0.480
Your Current Organism:
Basidiobolus meristosporus
NCBI taxonomy Id: 1314790
Other names: B. meristosporus CBS 931.73, Basidiobolus meristosporus CBS 931.73
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.