STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1Z2C5Splicing factor subunit; Belongs to the SF3B5 family. (83 aa)    
Predicted Functional Partners:
A0A1Y1Y9B4
RNA-binding domain-containing protein.
   
 0.999
A0A1Y1XS86
Matrin-type domain-containing protein.
   
 0.998
A0A1Y1XUW3
CPSF_A domain-containing protein.
   
 0.998
A0A1Y1Y9K1
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.998
A0A1Y1Z3G4
Uncharacterized protein.
   
 0.998
A0A1Y1Z497
DUF382-domain-containing protein.
    
 0.998
A0A1Y1ZEJ5
ARM repeat-containing protein.
    
 0.998
A0A1Y1XVF7
Matrin-type domain-containing protein.
   
 0.997
A0A1Y1Z7L0
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.997
A0A1Y1XW79
U2 small nuclear ribonucleo protein A.
   
 0.996
Your Current Organism:
Basidiobolus meristosporus
NCBI taxonomy Id: 1314790
Other names: B. meristosporus CBS 931.73, Basidiobolus meristosporus CBS 931.73
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.