STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_12443Hypothetical protein; COG1073 Hydrolases of the alpha/beta superfamily. (300 aa)    
Predicted Functional Partners:
ATO7_12448
Putative deacetylase.
       0.572
ATO7_12453
COG0438 Glycosyltransferase.
       0.572
ATO7_12458
Hypothetical protein.
       0.572
ATO7_05705
Triacylglycerol lipase; COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold.
  
   
 0.551
ATO7_06440
COG1309 Transcriptional regulator.
  
     0.504
ATO7_09122
COG1231 Monoamine oxidase.
  
  
  0.474
ATO7_12463
Lipase/esterase; COG0657 Esterase/lipase.
     
 0.436
ATO7_05335
CinA; COG1546 Uncharacterized protein (competence- and mitomycin-induced); Belongs to the CinA family.
 
 
  0.409
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
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