STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R4G445_RHOPRPutative e3 ubiquitin ligase. (315 aa)    
Predicted Functional Partners:
R4G2X9_RHOPR
Putative cdk activating kin; Belongs to the cyclin family.
   
 0.999
R4FM47_RHOPR
Putative transcription factor tfb4.
    
 0.998
T1I4Q7_RHOPR
Helicase ATP-binding domain-containing protein.
    
 0.998
T1HG45_RHOPR
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.997
T1HPF2_RHOPR
Uncharacterized protein.
    
 0.997
T1HP82_RHOPR
Uncharacterized protein.
    
 0.996
T1HWQ6_RHOPR
Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.
   
 0.996
T1IC26_RHOPR
HTH TFE/IIEalpha-type domain-containing protein.
    
 0.995
R4FML1_RHOPR
Putative dna-directed rna polymerase ii 33 kDa polypeptide.
    
 0.988
T1I5M8_RHOPR
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.987
Your Current Organism:
Rhodnius prolixus
NCBI taxonomy Id: 13249
Other names: R. prolixus
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