STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R4G8R9_RHOPRPutative atp-dependent rna helicase fal1; Belongs to the DEAD box helicase family. (400 aa)    
Predicted Functional Partners:
T1HS82_RHOPR
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
 0.999
R4G4D6_RHOPR
Putative exon-exon junction complex.
   
 0.997
T1IAY0_RHOPR
Uncharacterized protein.
    
 0.997
T1HBN2_RHOPR
RRM domain-containing protein.
   
 0.995
T1HS23_RHOPR
RRM domain-containing protein.
   
 0.994
T1HAH8_RHOPR
Smg4_UPF3 domain-containing protein.
   
 0.988
T1HB58_RHOPR
Uncharacterized protein.
   
 0.984
T1HM00_RHOPR
MI domain-containing protein.
   
 
 0.982
T1HSH8_RHOPR
RRM domain-containing protein.
   
 0.982
T1HGR9_RHOPR
RRM domain-containing protein.
   
 0.978
Your Current Organism:
Rhodnius prolixus
NCBI taxonomy Id: 13249
Other names: R. prolixus
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