T1HU61_RHOPR protein (Rhodnius prolixus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

T1HU61_RHOPR

Uncharacterized protein. (858 aa)

Predicted Functional Partners:

T1HIN4_RHOPR

0.696

inx-6

0.497

T1I1T4_RHOPR

0.487

R4G3D2_RHOPR

0.460

inx-4

0.442

T1HIZ0_RHOPR

0.439

R4G4A4_RHOPR

0.420

inx-2

0.417

T1I428_RHOPR

0.417

inx-3

0.414

Your Current Organism:

Rhodnius prolixus

NCBI taxonomy Id: 13249
Other names: R. prolixus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R4G3D2_RHOPR	T1HIN4_RHOPR	R4G3D2	T1HIN4	Putative zona pellucida-like domain protein.	Uncharacterized protein.	0.895
R4G3D2_RHOPR	T1HU61_RHOPR	R4G3D2	T1HU61	Putative zona pellucida-like domain protein.	Uncharacterized protein.	0.460
R4G3D2_RHOPR	inx-2	R4G3D2	T1HVH6	Putative zona pellucida-like domain protein.	Innexin; Structural component of the gap junctions. Belongs to the pannexin family.	0.456
R4G3D2_RHOPR	inx-3	R4G3D2	T1HXJ9	Putative zona pellucida-like domain protein.	Innexin; Structural component of the gap junctions. Belongs to the pannexin family.	0.452
R4G3D2_RHOPR	inx-6	R4G3D2	T1ICT1	Putative zona pellucida-like domain protein.	Innexin; Structural component of the gap junctions. Belongs to the pannexin family.	0.492
R4G4A4_RHOPR	T1HIN4_RHOPR	R4G4A4	T1HIN4	Putative mitogen-activated protein-binding protein-interacting protein.	Uncharacterized protein.	0.628
R4G4A4_RHOPR	T1HU61_RHOPR	R4G4A4	T1HU61	Putative mitogen-activated protein-binding protein-interacting protein.	Uncharacterized protein.	0.420
T1HIN4_RHOPR	R4G3D2_RHOPR	T1HIN4	R4G3D2	Uncharacterized protein.	Putative zona pellucida-like domain protein.	0.895
T1HIN4_RHOPR	R4G4A4_RHOPR	T1HIN4	R4G4A4	Uncharacterized protein.	Putative mitogen-activated protein-binding protein-interacting protein.	0.628
T1HIN4_RHOPR	T1HU61_RHOPR	T1HIN4	T1HU61	Uncharacterized protein.	Uncharacterized protein.	0.696
T1HIN4_RHOPR	T1I1T4_RHOPR	T1HIN4	T1I1T4	Uncharacterized protein.	Uncharacterized protein.	0.666
T1HIN4_RHOPR	T1I428_RHOPR	T1HIN4	T1I428	Uncharacterized protein.	Uncharacterized protein.	0.675
T1HIZ0_RHOPR	T1HU61_RHOPR	T1HIZ0	T1HU61	Glycosyltransferase family 92 protein; Belongs to the glycosyltransferase 92 family.	Uncharacterized protein.	0.439
T1HIZ0_RHOPR	inx-2	T1HIZ0	T1HVH6	Glycosyltransferase family 92 protein; Belongs to the glycosyltransferase 92 family.	Innexin; Structural component of the gap junctions. Belongs to the pannexin family.	0.410
T1HIZ0_RHOPR	inx-3	T1HIZ0	T1HXJ9	Glycosyltransferase family 92 protein; Belongs to the glycosyltransferase 92 family.	Innexin; Structural component of the gap junctions. Belongs to the pannexin family.	0.416
T1HIZ0_RHOPR	inx-6	T1HIZ0	T1ICT1	Glycosyltransferase family 92 protein; Belongs to the glycosyltransferase 92 family.	Innexin; Structural component of the gap junctions. Belongs to the pannexin family.	0.464
T1HU61_RHOPR	R4G3D2_RHOPR	T1HU61	R4G3D2	Uncharacterized protein.	Putative zona pellucida-like domain protein.	0.460
T1HU61_RHOPR	R4G4A4_RHOPR	T1HU61	R4G4A4	Uncharacterized protein.	Putative mitogen-activated protein-binding protein-interacting protein.	0.420
T1HU61_RHOPR	T1HIN4_RHOPR	T1HU61	T1HIN4	Uncharacterized protein.	Uncharacterized protein.	0.696
T1HU61_RHOPR	T1HIZ0_RHOPR	T1HU61	T1HIZ0	Uncharacterized protein.	Glycosyltransferase family 92 protein; Belongs to the glycosyltransferase 92 family.	0.439