T1HUU2_RHOPR protein (Rhodnius prolixus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

T1HUU2_RHOPR

Casein kinase II alpha subunit; Belongs to the protein kinase superfamily. (355 aa)

Predicted Functional Partners:

T1I5D3_RHOPR

0.986

T1I5E7_RHOPR

0.986

R4FNX0_RHOPR

0.955

T1I5C1_RHOPR

0.953

T1IAH5_RHOPR

0.950

T1HQ96_RHOPR

0.944

T1I6V0_RHOPR

0.914

T1I2H2_RHOPR

0.886

T1H850_RHOPR

0.882

T1HDU3_RHOPR

0.876

Your Current Organism:

Rhodnius prolixus

NCBI taxonomy Id: 13249
Other names: R. prolixus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R4FNX0_RHOPR	T1HUU2_RHOPR	R4FNX0	T1HUU2	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	Casein kinase II alpha subunit; Belongs to the protein kinase superfamily.	0.955
R4FNX0_RHOPR	T1I5C1_RHOPR	R4FNX0	T1I5C1	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	Uncharacterized protein.	0.999
R4FNX0_RHOPR	T1I5D3_RHOPR	R4FNX0	T1I5D3	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	0.960
R4FNX0_RHOPR	T1I5E7_RHOPR	R4FNX0	T1I5E7	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	0.960
T1H850_RHOPR	T1HUU2_RHOPR	T1H850	T1HUU2	Uncharacterized protein.	Casein kinase II alpha subunit; Belongs to the protein kinase superfamily.	0.882
T1HDU3_RHOPR	T1HQ96_RHOPR	T1HDU3	T1HQ96	G-patch domain-containing protein.	Nucleolar protein 6.	0.583
T1HDU3_RHOPR	T1HUU2_RHOPR	T1HDU3	T1HUU2	G-patch domain-containing protein.	Casein kinase II alpha subunit; Belongs to the protein kinase superfamily.	0.876
T1HDU3_RHOPR	T1I2H2_RHOPR	T1HDU3	T1I2H2	G-patch domain-containing protein.	NUC153 domain-containing protein.	0.611
T1HDU3_RHOPR	T1IAH5_RHOPR	T1HDU3	T1IAH5	G-patch domain-containing protein.	RRP7 domain-containing protein.	0.412
T1HQ96_RHOPR	T1HDU3_RHOPR	T1HQ96	T1HDU3	Nucleolar protein 6.	G-patch domain-containing protein.	0.583
T1HQ96_RHOPR	T1HUU2_RHOPR	T1HQ96	T1HUU2	Nucleolar protein 6.	Casein kinase II alpha subunit; Belongs to the protein kinase superfamily.	0.944
T1HQ96_RHOPR	T1I2H2_RHOPR	T1HQ96	T1I2H2	Nucleolar protein 6.	NUC153 domain-containing protein.	0.994
T1HQ96_RHOPR	T1I5D3_RHOPR	T1HQ96	T1I5D3	Nucleolar protein 6.	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	0.960
T1HQ96_RHOPR	T1I5E7_RHOPR	T1HQ96	T1I5E7	Nucleolar protein 6.	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	0.960
T1HQ96_RHOPR	T1IAH5_RHOPR	T1HQ96	T1IAH5	Nucleolar protein 6.	RRP7 domain-containing protein.	0.999
T1HUU2_RHOPR	R4FNX0_RHOPR	T1HUU2	R4FNX0	Casein kinase II alpha subunit; Belongs to the protein kinase superfamily.	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	0.955
T1HUU2_RHOPR	T1H850_RHOPR	T1HUU2	T1H850	Casein kinase II alpha subunit; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.882
T1HUU2_RHOPR	T1HDU3_RHOPR	T1HUU2	T1HDU3	Casein kinase II alpha subunit; Belongs to the protein kinase superfamily.	G-patch domain-containing protein.	0.876
T1HUU2_RHOPR	T1HQ96_RHOPR	T1HUU2	T1HQ96	Casein kinase II alpha subunit; Belongs to the protein kinase superfamily.	Nucleolar protein 6.	0.944
T1HUU2_RHOPR	T1I2H2_RHOPR	T1HUU2	T1I2H2	Casein kinase II alpha subunit; Belongs to the protein kinase superfamily.	NUC153 domain-containing protein.	0.886