T1IA79_RHOPR protein (Rhodnius prolixus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

T1IA79_RHOPR

Uncharacterized protein. (681 aa)

Predicted Functional Partners:

T1HIN4_RHOPR

0.864

T1HZ35_RHOPR

0.617

T1ID84_RHOPR

0.613

T1HD15_RHOPR

0.582

T1HH56_RHOPR

0.582

T1HZK8_RHOPR

0.582

T1HZL0_RHOPR

0.582

T1I2U5_RHOPR

0.582

T1HT25_RHOPR

0.560

T1IGB3_RHOPR

0.549

Your Current Organism:

Rhodnius prolixus

NCBI taxonomy Id: 13249
Other names: R. prolixus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1HD15_RHOPR	T1HH56_RHOPR	T1HD15	T1HH56	ANK_REP_REGION domain-containing protein.	RING-type domain-containing protein.	0.601
T1HD15_RHOPR	T1HIN4_RHOPR	T1HD15	T1HIN4	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.996
T1HD15_RHOPR	T1HT25_RHOPR	T1HD15	T1HT25	ANK_REP_REGION domain-containing protein.	CASPASE_P20 domain-containing protein; Belongs to the peptidase C14A family.	0.870
T1HD15_RHOPR	T1HZ35_RHOPR	T1HD15	T1HZ35	ANK_REP_REGION domain-containing protein.	Tyrosine-protein kinase otk.	0.729
T1HD15_RHOPR	T1HZK8_RHOPR	T1HD15	T1HZK8	ANK_REP_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.601
T1HD15_RHOPR	T1HZL0_RHOPR	T1HD15	T1HZL0	ANK_REP_REGION domain-containing protein.	MIB/HERC2 domain-containing protein.	0.705
T1HD15_RHOPR	T1I2U5_RHOPR	T1HD15	T1I2U5	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.656
T1HD15_RHOPR	T1IA79_RHOPR	T1HD15	T1IA79	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.582
T1HD15_RHOPR	T1IGB3_RHOPR	T1HD15	T1IGB3	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.688
T1HH56_RHOPR	T1HD15_RHOPR	T1HH56	T1HD15	RING-type domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.601
T1HH56_RHOPR	T1HIN4_RHOPR	T1HH56	T1HIN4	RING-type domain-containing protein.	Uncharacterized protein.	0.996
T1HH56_RHOPR	T1HT25_RHOPR	T1HH56	T1HT25	RING-type domain-containing protein.	CASPASE_P20 domain-containing protein; Belongs to the peptidase C14A family.	0.870
T1HH56_RHOPR	T1HZ35_RHOPR	T1HH56	T1HZ35	RING-type domain-containing protein.	Tyrosine-protein kinase otk.	0.729
T1HH56_RHOPR	T1HZK8_RHOPR	T1HH56	T1HZK8	RING-type domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.584
T1HH56_RHOPR	T1HZL0_RHOPR	T1HH56	T1HZL0	RING-type domain-containing protein.	MIB/HERC2 domain-containing protein.	0.614
T1HH56_RHOPR	T1I2U5_RHOPR	T1HH56	T1I2U5	RING-type domain-containing protein.	Uncharacterized protein.	0.625
T1HH56_RHOPR	T1IA79_RHOPR	T1HH56	T1IA79	RING-type domain-containing protein.	Uncharacterized protein.	0.582
T1HH56_RHOPR	T1IGB3_RHOPR	T1HH56	T1IGB3	RING-type domain-containing protein.	Uncharacterized protein.	0.688
T1HIN4_RHOPR	T1HD15_RHOPR	T1HIN4	T1HD15	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.996
T1HIN4_RHOPR	T1HH56_RHOPR	T1HIN4	T1HH56	Uncharacterized protein.	RING-type domain-containing protein.	0.996