STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VIPAS39VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog. (490 aa)    
Predicted Functional Partners:
ENSPVAP00000011134
annotation not available
   
 
 0.974
ENSPVAP00000001196
annotation not available
   
 
 0.940
PRDM4
PR/SET domain 4.
      
 0.778
VPS45
Vacuolar protein sorting 45 homolog.
   
  
 0.765
VPS16
VPS16 core subunit of CORVET and HOPS complexes.
   
  
 0.696
NBEAL2
Neurobeachin like 2.
      
 0.686
VPS39
VPS39 subunit of HOPS complex.
   
 
 0.653
VPS11
VPS11 core subunit of CORVET and HOPS complexes.
   
  
 0.627
VPS8
VPS8 subunit of CORVET complex.
   
  
 0.621
ENSPVAP00000015463
annotation not available
      
 0.599
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.