STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGMATAgmatinase. (352 aa)    
Predicted Functional Partners:
AZIN2
Antizyme inhibitor 2.
  
 
 0.973
SRM
Spermidine synthase.
  
 
 0.962
ODC1
Ornithine decarboxylase 1.
  
 
 0.955
OAT
Ornithine aminotransferase.
  
 0.942
HAL
Histidine ammonia-lyase.
  
 
 0.919
SMS
Spermine synthase.
  
 
 0.919
AOC1
Amine oxidase copper containing 1.
    
 0.906
OTC
Ornithine carbamoyltransferase.
   
 0.900
SAT2
Spermidine/spermine N1-acetyltransferase family member 2.
  
 
 0.890
ENSPVAP00000000263
annotation not available
  
 
 0.888
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.