STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF145Ring finger protein 145. (672 aa)    
Predicted Functional Partners:
DERL1
Derlin 1.
    
 0.828
DERL2
Derlin 2.
    
 0.824
DERL3
Derlin 3.
    
 0.824
ERLEC1
Endoplasmic reticulum lectin 1.
    
 0.816
OS9
OS9 endoplasmic reticulum lectin.
    
 0.816
SPATA5L1
Spermatogenesis associated 5 like 1.
    
 0.805
VCP
Valosin containing protein.
    
 0.805
SPATA5
Spermatogenesis associated 5.
    
 0.805
KATNAL2
Katanin catalytic subunit A1 like 2.
    
 0.803
SEL1L
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
    
 0.795
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.