STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF513Zinc finger protein 513. (543 aa)    
Predicted Functional Partners:
TTC7A
Tetratricopeptide repeat domain 7A.
      
 0.769
LYPD6
LY6/PLAUR domain containing 6.
      
 0.769
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
      
 0.695
PRPF31
pre-mRNA processing factor 31.
    
 
 0.682
ENSPVAP00000006200
annotation not available
    
  0.676
PRPF6
pre-mRNA processing factor 6.
    
 
 0.665
C1orf194
Chromosome 1 open reading frame 194.
      
 0.653
PRPF4
pre-mRNA processing factor 4.
      
 0.608
PRPF3
pre-mRNA processing factor 3.
      
 0.605
GTF2B
General transcription factor IIB.
    
 0.580
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.