STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000745065_00612Unannotated protein. (277 aa)    
Predicted Functional Partners:
GCA_000745065_00611
Unannotated protein.
 
 
 0.849
GCA_000745065_00610
Unannotated protein.
    
 0.807
GCA_000745065_00609
Unannotated protein.
  
 
 0.799
GCA_000745065_00864
Unannotated protein.
    
  0.670
GCA_000745065_00829
Unannotated protein.
  
 
 0.569
GCA_000745065_00607
Unannotated protein.
       0.521
GCA_000745065_00608
Unannotated protein.
       0.521
GCA_000745065_00875
Unannotated protein.
  
  
 0.427
GCA_000745065_01148
Unannotated protein.
   
  0.401
GCA_000745065_01355
Unannotated protein.
 
 
  0.400
Your Current Organism:
Thermus caliditerrae
NCBI taxonomy Id: 1330700
Other names: CCTCC 2012061, DSM 25901, T. caliditerrae, Thermus caliditerrae Ming et al. 2014, Thermus sp. YIM 77777, Thermus sp. YIM 77925, YIM 77925
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.