U5DCV4_AMBTC protein (Amborella trichopoda) - STRING interaction network

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

U5DCV4_AMBTC

RRM domain-containing protein. (264 aa)

Predicted Functional Partners:

U5DG05_AMBTC

0.992

W1NTI9_AMBTC

0.969

U5DBS2_AMBTC

0.968

W1PPY3_AMBTC

0.967

W1PIH2_AMBTC

0.966

W1NUF8_AMBTC

0.964

W1PWG6_AMBTC

0.964

U5DCR1_AMBTC

0.952

W1PHU8_AMBTC

0.946

W1NGL8_AMBTC

0.939

Your Current Organism:

Amborella trichopoda

NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
U5DBS2_AMBTC	U5DCR1_AMBTC	U5DBS2	U5DCR1	RNA helicase.	Uncharacterized protein.	0.801
U5DBS2_AMBTC	U5DCV4_AMBTC	U5DBS2	U5DCV4	RNA helicase.	RRM domain-containing protein.	0.968
U5DBS2_AMBTC	U5DG05_AMBTC	U5DBS2	U5DG05	RNA helicase.	Uncharacterized protein.	0.960
U5DBS2_AMBTC	W1NGL8_AMBTC	U5DBS2	W1NGL8	RNA helicase.	WD_REPEATS_REGION domain-containing protein.	0.955
U5DBS2_AMBTC	W1NTI9_AMBTC	U5DBS2	W1NTI9	RNA helicase.	Uncharacterized protein.	0.971
U5DBS2_AMBTC	W1NUF8_AMBTC	U5DBS2	W1NUF8	RNA helicase.	NUC153 domain-containing protein.	0.995
U5DBS2_AMBTC	W1PHU8_AMBTC	U5DBS2	W1PHU8	RNA helicase.	Uncharacterized protein.	0.809
U5DBS2_AMBTC	W1PIH2_AMBTC	U5DBS2	W1PIH2	RNA helicase.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.866
U5DBS2_AMBTC	W1PPY3_AMBTC	U5DBS2	W1PPY3	RNA helicase.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.705
U5DBS2_AMBTC	W1PWG6_AMBTC	U5DBS2	W1PWG6	RNA helicase.	Uncharacterized protein.	0.745
U5DCR1_AMBTC	U5DBS2_AMBTC	U5DCR1	U5DBS2	Uncharacterized protein.	RNA helicase.	0.801
U5DCR1_AMBTC	U5DCV4_AMBTC	U5DCR1	U5DCV4	Uncharacterized protein.	RRM domain-containing protein.	0.952
U5DCR1_AMBTC	U5DG05_AMBTC	U5DCR1	U5DG05	Uncharacterized protein.	Uncharacterized protein.	0.988
U5DCR1_AMBTC	W1NGL8_AMBTC	U5DCR1	W1NGL8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.999
U5DCR1_AMBTC	W1NTI9_AMBTC	U5DCR1	W1NTI9	Uncharacterized protein.	Uncharacterized protein.	0.993
U5DCR1_AMBTC	W1NUF8_AMBTC	U5DCR1	W1NUF8	Uncharacterized protein.	NUC153 domain-containing protein.	0.993
U5DCR1_AMBTC	W1PHU8_AMBTC	U5DCR1	W1PHU8	Uncharacterized protein.	Uncharacterized protein.	0.819
U5DCR1_AMBTC	W1PIH2_AMBTC	U5DCR1	W1PIH2	Uncharacterized protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.994
U5DCR1_AMBTC	W1PPY3_AMBTC	U5DCR1	W1PPY3	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.546
U5DCR1_AMBTC	W1PWG6_AMBTC	U5DCR1	W1PWG6	Uncharacterized protein.	Uncharacterized protein.	0.935