STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U5DEB4_AMBTCAmino_oxidase domain-containing protein. (522 aa)    
Predicted Functional Partners:
W1PW86_AMBTC
PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.
     
 0.943
W1PAK9_AMBTC
Amine oxidase.
     
 0.929
U5DCG1_AMBTC
PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.
     
 0.928
W1PD84_AMBTC
PABS domain-containing protein.
     
 0.928
W1PDY2_AMBTC
PABS domain-containing protein.
     
 0.928
W1PQT7_AMBTC
Amino_oxidase domain-containing protein.
  
  
0.924
W1NUD9_AMBTC
Amino_oxidase domain-containing protein.
  
  
0.921
W1PXN1_AMBTC
Uncharacterized protein.
  
  
0.919
U5DD78_AMBTC
Amino_oxidase domain-containing protein.
  
  
0.918
W1PG48_AMBTC
Amino_oxidase domain-containing protein.
  
  
0.917
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.