STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1NE23_AMBTCUncharacterized protein. (154 aa)    
Predicted Functional Partners:
U5D9M4_AMBTC
UTP--glucose-1-phosphate uridylyltransferase.
    
 0.925
W1NZ17_AMBTC
Remorin_C domain-containing protein.
  
 0.899
W1P0F4_AMBTC
Uncharacterized protein.
  
 0.899
W1PWH7_AMBTC
Uncharacterized protein.
  
 0.899
W1PXF0_AMBTC
Uncharacterized protein.
  
 0.899
W1NF27_AMBTC
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 0.818
W1NFX5_AMBTC
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 0.818
U5D116_AMBTC
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 0.798
U5D2E2_AMBTC
Epimerase domain-containing protein.
  
 0.798
W1NUU8_AMBTC
Epimerase domain-containing protein.
  
 0.798
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.