STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1NGU0_AMBTCTerpene_synth_C domain-containing protein. (156 aa)    
Predicted Functional Partners:
W1NPU6_AMBTC
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family.
  
 0.793
W1P1X2_AMBTC
Nudix hydrolase domain-containing protein.
  
 
 0.764
W1PYH9_AMBTC
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 
 0.733
W1PPK0_AMBTC
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
  
 0.657
W1NG76_AMBTC
Pyr_redox_2 domain-containing protein.
  
 0.627
U5CXY5_AMBTC
Uncharacterized protein.
  
 0.606
U5D4C4_AMBTC
Uncharacterized protein.
  
 0.606
W1P0F0_AMBTC
Uncharacterized protein.
  
 0.606
W1P9S8_AMBTC
Uncharacterized protein.
  
 0.606
W1PBN7_AMBTC
Uncharacterized protein.
  
 0.606
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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