W1NIB6_AMBTC protein (Amborella trichopoda) - STRING interaction network

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Score

W1NIB6_AMBTC

Uncharacterized protein. (178 aa)

Predicted Functional Partners:

W1PCZ1_AMBTC

0.967

W1NLV6_AMBTC

0.928

U5D3G0_AMBTC

0.919

W1PJY8_AMBTC

0.917

U5DCM0_AMBTC

0.909

W1NJ72_AMBTC

0.907

U5CZT5_AMBTC

0.891

U5D9E3_AMBTC

0.890

U5D4P8_AMBTC

0.888

W1NIX1_AMBTC

0.888

Your Current Organism:

Amborella trichopoda

NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
U5CZT5_AMBTC	U5D3G0_AMBTC	U5CZT5	U5D3G0	RPOLD domain-containing protein.	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	0.971
U5CZT5_AMBTC	U5D4P8_AMBTC	U5CZT5	U5D4P8	RPOLD domain-containing protein.	Uncharacterized protein.	0.996
U5CZT5_AMBTC	U5D9E3_AMBTC	U5CZT5	U5D9E3	RPOLD domain-containing protein.	Uncharacterized protein.	0.956
U5CZT5_AMBTC	U5DCM0_AMBTC	U5CZT5	U5DCM0	RPOLD domain-containing protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.975
U5CZT5_AMBTC	W1NIB6_AMBTC	U5CZT5	W1NIB6	RPOLD domain-containing protein.	Uncharacterized protein.	0.891
U5CZT5_AMBTC	W1NIX1_AMBTC	U5CZT5	W1NIX1	RPOLD domain-containing protein.	Uncharacterized protein.	0.953
U5CZT5_AMBTC	W1NJ72_AMBTC	U5CZT5	W1NJ72	RPOLD domain-containing protein.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.949
U5CZT5_AMBTC	W1NLV6_AMBTC	U5CZT5	W1NLV6	RPOLD domain-containing protein.	Uncharacterized protein.	0.984
U5CZT5_AMBTC	W1PCZ1_AMBTC	U5CZT5	W1PCZ1	RPOLD domain-containing protein.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.951
U5CZT5_AMBTC	W1PJY8_AMBTC	U5CZT5	W1PJY8	RPOLD domain-containing protein.	C2H2-type domain-containing protein.	0.957
U5D3G0_AMBTC	U5CZT5_AMBTC	U5D3G0	U5CZT5	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	RPOLD domain-containing protein.	0.971
U5D3G0_AMBTC	U5D4P8_AMBTC	U5D3G0	U5D4P8	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	Uncharacterized protein.	0.950
U5D3G0_AMBTC	U5D9E3_AMBTC	U5D3G0	U5D9E3	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	Uncharacterized protein.	0.973
U5D3G0_AMBTC	U5DCM0_AMBTC	U5D3G0	U5DCM0	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.985
U5D3G0_AMBTC	W1NIB6_AMBTC	U5D3G0	W1NIB6	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	Uncharacterized protein.	0.919
U5D3G0_AMBTC	W1NIX1_AMBTC	U5D3G0	W1NIX1	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	Uncharacterized protein.	0.981
U5D3G0_AMBTC	W1NJ72_AMBTC	U5D3G0	W1NJ72	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.975
U5D3G0_AMBTC	W1NLV6_AMBTC	U5D3G0	W1NLV6	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	Uncharacterized protein.	0.987
U5D3G0_AMBTC	W1PCZ1_AMBTC	U5D3G0	W1PCZ1	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.981
U5D3G0_AMBTC	W1PJY8_AMBTC	U5D3G0	W1PJY8	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	C2H2-type domain-containing protein.	0.985