STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1NWX5_AMBTCUncharacterized protein. (723 aa)    
Predicted Functional Partners:
U5D672_AMBTC
ANK_REP_REGION domain-containing protein.
  
  
 0.523
W1PIA4_AMBTC
Uncharacterized protein.
  
  
 0.519
W1PFS2_AMBTC
ANK_REP_REGION domain-containing protein.
  
  
 0.500
W1NKW8_AMBTC
ANK_REP_REGION domain-containing protein.
  
  
  0.484
W1PL15_AMBTC
Uncharacterized protein.
  
  
  0.479
U5D100_AMBTC
Uncharacterized protein.
  
  
  0.463
W1PHL9_AMBTC
ANK_REP_REGION domain-containing protein.
  
  
  0.450
W1NWE1_AMBTC
ANK_REP_REGION domain-containing protein.
  
  
  0.441
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.