W1P100_AMBTC protein (Amborella trichopoda) - STRING interaction network

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second shell of interactors

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Predicted Interactions

gene neighborhood

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protein homology

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Score

W1P100_AMBTC

Uncharacterized protein. (166 aa)

Predicted Functional Partners:

U5D3U8_AMBTC

0.655

W1PLW2_AMBTC

0.622

U5DA74_AMBTC

0.561

U5D9H7_AMBTC

0.543

W1PID0_AMBTC

0.529

W1PZJ3_AMBTC

0.520

W1P6U2_AMBTC

0.484

W1PBA6_AMBTC

0.484

W1P5A8_AMBTC

0.475

W1PBU8_AMBTC

0.475

Your Current Organism:

Amborella trichopoda

NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
U5D3U8_AMBTC	W1P100_AMBTC	U5D3U8	W1P100	Uncharacterized protein.	Uncharacterized protein.	0.655
U5D3U8_AMBTC	W1P6U2_AMBTC	U5D3U8	W1P6U2	Uncharacterized protein.	3'-5' exonuclease domain-containing protein.	0.784
U5D3U8_AMBTC	W1PBA6_AMBTC	U5D3U8	W1PBA6	Uncharacterized protein.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.784
U5D3U8_AMBTC	W1PLW2_AMBTC	U5D3U8	W1PLW2	Uncharacterized protein.	DNA polymerase.	0.999
U5D9H7_AMBTC	U5DA74_AMBTC	U5D9H7	U5DA74	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.999
U5D9H7_AMBTC	W1P100_AMBTC	U5D9H7	W1P100	Small nuclear ribonucleoprotein Sm D2.	Uncharacterized protein.	0.543
U5D9H7_AMBTC	W1PID0_AMBTC	U5D9H7	W1PID0	Small nuclear ribonucleoprotein Sm D2.	Sm domain-containing protein.	0.999
U5D9H7_AMBTC	W1PZJ3_AMBTC	U5D9H7	W1PZJ3	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein G.	0.999
U5DA74_AMBTC	U5D9H7_AMBTC	U5DA74	U5D9H7	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein Sm D2.	0.999
U5DA74_AMBTC	W1P100_AMBTC	U5DA74	W1P100	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Uncharacterized protein.	0.561
U5DA74_AMBTC	W1PID0_AMBTC	U5DA74	W1PID0	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Sm domain-containing protein.	0.999
U5DA74_AMBTC	W1PZJ3_AMBTC	U5DA74	W1PZJ3	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein G.	0.999
W1P100_AMBTC	U5D3U8_AMBTC	W1P100	U5D3U8	Uncharacterized protein.	Uncharacterized protein.	0.655
W1P100_AMBTC	U5D9H7_AMBTC	W1P100	U5D9H7	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D2.	0.543
W1P100_AMBTC	U5DA74_AMBTC	W1P100	U5DA74	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.561
W1P100_AMBTC	W1P5A8_AMBTC	W1P100	W1P5A8	Uncharacterized protein.	Uncharacterized protein.	0.475
W1P100_AMBTC	W1P6U2_AMBTC	W1P100	W1P6U2	Uncharacterized protein.	3'-5' exonuclease domain-containing protein.	0.484
W1P100_AMBTC	W1PBA6_AMBTC	W1P100	W1PBA6	Uncharacterized protein.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.484
W1P100_AMBTC	W1PBU8_AMBTC	W1P100	W1PBU8	Uncharacterized protein.	Uncharacterized protein.	0.475
W1P100_AMBTC	W1PID0_AMBTC	W1P100	W1PID0	Uncharacterized protein.	Sm domain-containing protein.	0.529